Aliases : NFD2, HMG BETA 1, HMGB2, NFD02
Description : DNA bending architectural protein *(HMG-B) & original description: none
Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G05330 | No alias | HMG-box (high mobility group) DNA-binding family protein | 0.03 | OrthoFinder output from all 47 species | |
Als_g22881 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000073.45 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000655.17 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000984.29 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021623.8 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g30007 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g082700.3.1 | NFD2, HMG BETA... | HMG1/2-like protein OS=Ipomoea nil (sp|p40619|hmgl_iponi : 82.0) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0051499 | D-aminoacyl-tRNA deacylase activity | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009071 | HMG_box_dom | 50 | 119 |
No external refs found! |