Als_g05684 (MCM2, ATMCM2)

Aliases : MCM2, ATMCM2

Description : component *(MCM2) of MCM replicative DNA helicase complex & original description: none

Gene families : OG0004206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g05684
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00242770	MCM2, ATMCM2,...	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.08	OrthoFinder output from all 47 species
AT1G44900	MCM2, ATMCM2	minichromosome maintenance (MCM2/3/5) family protein	0.07	OrthoFinder output from all 47 species
Adi_g014964	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ala_g28049	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.07	OrthoFinder output from all 47 species
Aop_g09602	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Aspi01Gene05001.t1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Azfi_s0207.g057897	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
Ceric.10G002200.1	MCM2, ATMCM2,...	component *(MCM2) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.77	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Cre07.g338000	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.03	OrthoFinder output from all 47 species
Dac_g07583	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.1	OrthoFinder output from all 47 species
Dcu_g07094	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Ehy_g18175	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.03	OrthoFinder output from all 47 species
GSVIVT01001119001	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.07	OrthoFinder output from all 47 species
Gb_10893	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.07	OrthoFinder output from all 47 species
LOC_Os11g29380.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.09	OrthoFinder output from all 47 species
Len_g09187	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.11	OrthoFinder output from all 47 species
Lfl_g39064	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
MA_10431703g0010	MCM2, ATMCM2	DNA replication licensing factor MCM2 OS=Oryza sativa...	0.07	OrthoFinder output from all 47 species
Mp3g00130.1	MCM2, ATMCM2	component MCM2 of MCM replicative DNA helicase complex	0.08	OrthoFinder output from all 47 species
Msp_g13902	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Nbi_g03122	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.14	OrthoFinder output from all 47 species
Ppi_g15758	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023976	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Sam_g04440	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g14285	No alias	component *(MCM2) of MCM replicative DNA helicase...	0.08	OrthoFinder output from all 47 species
Smo88537	MCM2, ATMCM2	Cell cycle.interphase.DNA replication.preinitiation.MCM...	0.03	OrthoFinder output from all 47 species
Solyc11g040120.3.1	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.05	OrthoFinder output from all 47 species
Spa_g05361	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.13	OrthoFinder output from all 47 species
Tin_g44536	MCM2, ATMCM2	component *(MCM2) of MCM replicative DNA helicase...	0.12	OrthoFinder output from all 47 species
Zm00001e021446_P001	MCM2, ATMCM2,...	component MCM2 of MCM replicative DNA helicase complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032508	DNA duplex unwinding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
CC	GO:0031262	Ndc80 complex	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041562	MCM_lid	547	631
IPR033762	MCM_OB	122	249
IPR001208	MCM_dom	290	512
IPR027925	MCM_N	23	116

External Links

No external refs found!

Als_g05684 (MCM2, ATMCM2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation