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  5. Als_g05674

Als_g05674


Description : not classified & original description: none


Gene families : OG0014354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014354_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05674

Target Alias Description ECC score Gene Family Method Actions
Cba_g19558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08852 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31922 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014342 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species
Sam_g29646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12056 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 461 486
IPR002885 Pentatricopeptide_repeat 330 353
IPR002885 Pentatricopeptide_repeat 563 586
IPR002885 Pentatricopeptide_repeat 229 253
IPR002885 Pentatricopeptide_repeat 358 386
IPR002885 Pentatricopeptide_repeat 257 287
IPR046848 E_motif 605 665
IPR002885 Pentatricopeptide_repeat 156 202
IPR002885 Pentatricopeptide_repeat 487 533
No external refs found!