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  5. Als_g05650

Als_g05650 (BUM1, SHL, STM, WAM, WAM1, BUM)


Aliases : BUM1, SHL, STM, WAM, WAM1, BUM

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05650

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.02 OrthoFinder output from all 47 species
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.03 OrthoFinder output from all 47 species
Aev_g04111 KNAT4 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13443 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49427.t1 KNAT4, Aspi01Gene49427 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05224 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G031700.1 KNAT3, Ceric.10G031700 KNOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01018257001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Nbi_g27135 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07720 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c5_26440V3.1 KNAT3, Pp3c5_26440 KNOTTED1-like homeobox gene 3 0.01 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g041820.3.1 KNAT3, Solyc08g041820 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Spa_g47799 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47800 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56194 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005539 ELK_dom 332 352
IPR005541 KNOX2 232 277
IPR005540 KNOX1 181 220
IPR008422 Homeobox_KN_domain 371 410
No external refs found!