Als_g05138

Description : component *(FES1) of FRI-C transcription effector complex & original description: none

Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g05138

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00154p00087040	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT3G18640	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.02	OrthoFinder output from all 47 species
AT3G26850	No alias	histone-lysine N-methyltransferases	0.03	OrthoFinder output from all 47 species
Adi_g020080	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Adi_g086845	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Ala_g14556	No alias	component *(FES1) of FRI-C transcription effector...	0.06	OrthoFinder output from all 47 species
Ala_g33431	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Aob_g22679	No alias	component *(FES1) of FRI-C transcription effector...	0.05	OrthoFinder output from all 47 species
Aob_g28684	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g31626	No alias	component *(FES1) of FRI-C transcription effector...	0.05	OrthoFinder output from all 47 species
Cba_g23169	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Ceric.12G018000.1	Ceric.12G018000	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ceric.20G066500.1	Ceric.20G066500	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Ceric.20G084000.1	Ceric.20G084000	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Cre01.g003450	No alias	No description available	0.01	OrthoFinder output from all 47 species
Dcu_g07178	No alias	component *(FES1) of FRI-C transcription effector...	0.08	OrthoFinder output from all 47 species
Ehy_g06125	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Ehy_g18865	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
GSVIVT01008114001	No alias	Zinc finger CCCH domain-containing protein 38...	0.03	OrthoFinder output from all 47 species
GSVIVT01010035001	ACCD	RNA biosynthesis.transcriptional activation.C3H zinc...	0.04	OrthoFinder output from all 47 species
Gb_26302	No alias	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g11580.1	LOC_Os03g11580	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os08g04170.1	LOC_Os08g04170	C3H zinc finger transcription factor	0.06	OrthoFinder output from all 47 species
Len_g20647	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Len_g31683	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Lfl_g05738	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Lfl_g29094	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
MA_111475g0020	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_321233g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_8408g0030	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp1g05400.1	No alias	Zinc finger CCCH domain-containing protein 55 OS=Oryza...	0.04	OrthoFinder output from all 47 species
Nbi_g04479	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ore_g08246	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30501	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Ore_g37073	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ore_g44437	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g61674	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ppi_g08786	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Ppi_g11003	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Sam_g14643	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Sam_g39875	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Smo439131	No alias	No description available	0.02	OrthoFinder output from all 47 species
Solyc03g006350.3.1	FES1, Solyc03g006350	C3H zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Solyc06g069440.3.1	Solyc06g069440	Zinc finger CCCH domain-containing protein 38...	0.03	OrthoFinder output from all 47 species
Spa_g08435	No alias	component *(FES1) of FRI-C transcription effector...	0.04	OrthoFinder output from all 47 species
Spa_g17866	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Spa_g41981	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g53143	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10851	No alias	component *(FES1) of FRI-C transcription effector...	0.06	OrthoFinder output from all 47 species
Zm00001e040314_P001	Zm00001e040314	C3H zinc finger transcription factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0010921	regulation of phosphatase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019902	phosphatase binding	IEP	HCCA
MF	GO:0019903	protein phosphatase binding	IEP	HCCA
CC	GO:0031011	Ino80 complex	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0035303	regulation of dephosphorylation	IEP	HCCA
BP	GO:0035304	regulation of protein dephosphorylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051336	regulation of hydrolase activity	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	HCCA
CC	GO:0097346	INO80-type complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000061	Surp	155	205

External Links

No external refs found!

Als_g05138

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation