Aliases : ATPMEPCRF, PMEPCRF
Description : EC_3.1 hydrolase acting on ester bond & original description: none
Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00238240 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00007p00101250 | ATPMEPCRA,... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00021p00242180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00071p00109420 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00129p00070300 | PME1, ATPME1,... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
AT1G02810 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.06 | OrthoFinder output from all 47 species | |
AT1G53830 | ATPME2, PME2 | pectin methylesterase 2 | 0.02 | OrthoFinder output from all 47 species | |
AT3G10710 | RHS12 | root hair specific 12 | 0.03 | OrthoFinder output from all 47 species | |
AT3G49220 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | OrthoFinder output from all 47 species | |
AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
AT5G51500 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | OrthoFinder output from all 47 species | |
Aev_g06111 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aev_g20237 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g21164 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g26378 | No alias | pectin methylesterase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g26087 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene10964.t1 | Aspi01Gene10964 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene45157.t1 | ATPME2, PME2,... | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0205.g057784 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g15947 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g51187 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Dde_g48560 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08496 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g09100 | ATPME3, PME3 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031667001 | PME61 | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g15039.1 | LOC_Os01g15039 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g21034.1 | ATPME3, PME3,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g65790.1 | LOC_Os01g65790 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g54190.1 | PME61, LOC_Os02g54190 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g47830.1 | ATPME3, PME3,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
MA_101025g0010 | ATPMEPCRF, PMEPCRF | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
MA_10434002g0010 | No alias | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
MA_648837g0010 | ATPMEPCRF, PMEPCRF | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
MA_84680g0010 | ATPME2, PME2 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g01365 | PME44, ATPME44 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g13298 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g15067 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g15225 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g18095 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20165 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057220.3.1 | Solyc01g057220 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g083840.3.1 | Solyc03g083840 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g017600.3.1 | PME44, ATPME44,... | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g005770.2.1 | Solyc11g005770 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g01966 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g13216 | No alias | EC_3.1 hydrolase acTing on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g20566 | No alias | EC_3.1 hydrolase acTing on ester bond & original... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
MF | GO:0005507 | copper ion binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |