1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g05002

Als_g05002


Description : nucleoporin of nuclear pore complex *(NUP50) & original description: none


Gene families : OG0003460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g05002

Target Alias Description ECC score Gene Family Method Actions
Cba_g24296 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Cba_g68744 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03082 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g12860 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR015007 NUP2/50/61 13 74
IPR000156 Ran_bind_dom 357 469
No external refs found!