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  5. Als_g04462

Als_g04462


Description : not classified & original description: none


Gene families : OG0012116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04462

Target Alias Description ECC score Gene Family Method Actions
Cba_g75126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G076500.1 Ceric.03G076500 not classified & original description: pacid=50572762... 0.03 OrthoFinder output from all 47 species
Dde_g13418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02343 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g19367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 210 256
IPR002885 Pentatricopeptide_repeat 408 454
IPR002885 Pentatricopeptide_repeat 307 353
IPR002885 Pentatricopeptide_repeat 677 723
IPR002885 Pentatricopeptide_repeat 109 155
IPR002885 Pentatricopeptide_repeat 576 623
IPR002885 Pentatricopeptide_repeat 744 775
IPR002885 Pentatricopeptide_repeat 651 675
IPR002885 Pentatricopeptide_repeat 484 509
No external refs found!