1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g04360

Als_g04360 (SPL3)


Aliases : SPL3

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04360
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 OrthoFinder output from all 47 species
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.05 OrthoFinder output from all 47 species
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.02 OrthoFinder output from all 47 species
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.02 OrthoFinder output from all 47 species
Adi_g058139 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17452 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38965 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14889 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14890 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06796 SPL3 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22380 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12656.t1 SPL8, Aspi01Gene12656 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26291.t1 SPL3, Aspi01Gene26291 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33252.t1 SPL8, Aspi01Gene33252 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61092.t1 SPL8, Aspi01Gene61092 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043231 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0147.g053031 SPL8 SBP-type transcription factor & original description: CDS=1-2847 0.05 OrthoFinder output from all 47 species
Azfi_s0213.g058306 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g75896 SPL2 SBP-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Dcu_g03001 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07628 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12554 SPL2 SBP-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g12555 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48961 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08477 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19323 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003836001 SPL12 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Gb_03922 SPL2 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Gb_15605 SPL8 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08070.1 SPL8, LOC_Os02g08070 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
LOC_Os08g41940.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17821 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435426g0010 AtSPL9, SPL9 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_92489g0010 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.08 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06307 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08289 SPL3 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24530 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g25103 SPL11 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07869 SPL2 SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43928 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48098 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524 SPL2 SBP-type transcription factor & original description: CDS=1-1641 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024379 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g090730.3.1 SPL8, Solyc01g090730 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc07g053810.3.1 SPL3, Solyc07g053810 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g38145 SPL10 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09011 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10032 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13693 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e028442_P002 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 198 272
No external refs found!