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  5. Als_g04313

Als_g04313


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04313

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene13328.t1 Aspi01Gene13328 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g16183 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g01510 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_100608g0010 No alias phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species
Mp1g25860.1 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g11761 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g04015 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g07993 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Pir_g12494 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g03836 No alias substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g30219 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008048 AFR substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo411144 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Zm00001e004803_P001 Zm00001e004803 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 73 108
IPR006652 Kelch_1 208 255
IPR006652 Kelch_1 165 205
No external refs found!