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  5. Als_g04308

Als_g04308


Description : VPS23-interacting protein *(SH3P2) & original description: none


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04308

Target Alias Description ECC score Gene Family Method Actions
AT1G31440 No alias SH3 domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g020840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021367001 No alias SH3 domain-containing protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pir_g09445 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10115 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g110300.4.1 Solyc01g110300 VPS23-interacting protein (SH3P2) 0.03 OrthoFinder output from all 47 species
Solyc08g074780.3.1 Solyc08g074780 SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 310 354
No external refs found!