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  5. Als_g04153

Als_g04153 (NRPD5, ATRPABC24.3,...)


Aliases : NRPD5, ATRPABC24.3, NRPB5, RPB5A

Description : component *(NRPE5) of RNA polymerase V complex & original description: none


Gene families : OG0003853 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003853_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g04153

Target Alias Description ECC score Gene Family Method Actions
Zm00001e007759_P002 NRPD5,... subunit 5 of RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000783 RNA_pol_subH/Rpb5_C 136 208
IPR005571 RNA_pol_Rpb5_N 9 93
No external refs found!