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  5. Als_g03888

Als_g03888 (PUB44, SAUL1, ATPUB44)


Aliases : PUB44, SAUL1, ATPUB44

Description : E3 ubiquitin ligase *(SAUL) & original description: none


Gene families : OG0006654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006654_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03888

Target Alias Description ECC score Gene Family Method Actions
Ala_g10640 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59298.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02004 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g00959 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25171 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23775 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
MA_105202g0030 PUB38, ATPUB38 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Ppi_g03239 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Smo444776 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Tin_g05228 PUB44, SAUL1, ATPUB44 E3 ubiquiTin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06131 No alias E3 ubiquiTin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 271 339
IPR000225 Armadillo 586 624
No external refs found!