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  5. Als_g03884

Als_g03884


Description : not classified & original description: none


Gene families : OG0012413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03884

Target Alias Description ECC score Gene Family Method Actions
Aop_g10903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0102.g044565 CRR22 not classified & original description: CDS=1-1587 0.05 OrthoFinder output from all 47 species
Dac_g29351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 749 773
IPR002885 Pentatricopeptide_repeat 110 138
IPR002885 Pentatricopeptide_repeat 182 207
IPR002885 Pentatricopeptide_repeat 649 668
IPR002885 Pentatricopeptide_repeat 576 620
IPR002885 Pentatricopeptide_repeat 209 247
IPR002885 Pentatricopeptide_repeat 674 721
IPR002885 Pentatricopeptide_repeat 278 324
IPR002885 Pentatricopeptide_repeat 373 418
IPR002885 Pentatricopeptide_repeat 472 519
No external refs found!