1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g03866

Als_g03866 (ARF6)


Aliases : ARF6

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03866

Target Alias Description ECC score Gene Family Method Actions
Ala_g11834 ARF16 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g51944 ARF19, IAA22, ARF11 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0011.g012740 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: CDS=1-2724 0.03 OrthoFinder output from all 47 species
Azfi_s0390.g067670 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description:... 0.11 OrthoFinder output from all 47 species
Azfi_s0433.g069577 ARF6 ARF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01011008001 HSS, ARF1-BP, ARF2, ORE14 RNA biosynthesis.transcriptional activation.B3... 0.08 OrthoFinder output from all 47 species
LOC_Os04g57610.1 ARF8, ATARF8,... transcription factor (ARF) 0.05 OrthoFinder output from all 47 species
LOC_Os12g41950.1 ARF6, LOC_Os12g41950 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Pnu_g19455 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019239 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: CDS=1-3375 0.01 OrthoFinder output from all 47 species
Solyc03g031970.4.1 ARF8, ATARF8,... transcription factor (ARF) 0.08 OrthoFinder output from all 47 species
Solyc03g118290.3.1 HSS, ARF1-BP,... transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Solyc05g047460.3.1 ARF19, IAA22,... transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Solyc07g016180.3.1 ARF19, IAA22,... transcription factor (ARF) 0.06 OrthoFinder output from all 47 species
Spa_g26009 ARF6 ARF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010525 ARF_dom 265 347
IPR033389 AUX/IAA_dom 802 886
IPR003340 B3_DNA-bd 138 239
No external refs found!