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  5. Als_g03821

Als_g03821 (SHM7)


Aliases : SHM7

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03821

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262120 SHM4,... Amino acid metabolism.biosynthesis.serine... 0.03 OrthoFinder output from all 47 species
AMTR_s00050p00206090 AtSHMT3, SHM3,... Serine hydroxymethyltransferase 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54986.t1 SHM4, Aspi01Gene54986 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010132 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.21G046600.1 SHM7, Ceric.21G046600 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
MA_730617g0010 AtSHMT3, SHM3 serine hydroxymethyltransferase 0.04 OrthoFinder output from all 47 species
Pnu_g16808 AtSHMT3, SHM3 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009449 AtSHMT3, SHM3 not classified & original description: CDS=1-555 0.03 OrthoFinder output from all 47 species
Smo270566 STM, SHM1, SHMT1 Photosynthesis.photorespiration.serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e028647_P001 SHM7, Zm00001e028647 serine hydroxymethyltransferase. serine hydroxymethyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 304 708
No external refs found!