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  5. Als_g03807

Als_g03807 (LACS4)


Aliases : LACS4

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03807
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT2G47240 CER8, LACS1 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Aev_g42382 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08534 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017932001 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
LOC_Os06g06350.1 LACS4, LOC_Os06g06350 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g04990.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
Len_g14280 LACS6, ATLACS6 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g03690 ATLACS7, LACS7 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 60 532
IPR025110 AMP-bd_C 542 616
No external refs found!