Als_g03541

Description : not classified & original description: none

Gene families : OG0002687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002687_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g03541

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00201p00015360	evm_27.TU.AmTr_v1...	Cold shock protein 1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Adi_g017565	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g088448	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g14685	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12569	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g17337	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g00896	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05243	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01808	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02273	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27254	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g46327	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	49	64
IPR001878	Znf_CCHC	169	184
IPR001878	Znf_CCHC	87	101
IPR001878	Znf_CCHC	132	147
IPR001878	Znf_CCHC	201	214
IPR001878	Znf_CCHC	219	235
IPR001878	Znf_CCHC	67	82
IPR001878	Znf_CCHC	150	164

External Links

No external refs found!