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  5. Als_g03213

Als_g03213


Description : component *(DDR) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0000785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03213
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00209930 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G21560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 OrthoFinder output from all 47 species
AT1G67780 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.06 OrthoFinder output from all 47 species
AT2G23530 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 0.07 OrthoFinder output from all 47 species
AT5G38690 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.03 OrthoFinder output from all 47 species
Adi_g104406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20760 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g26555 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Aop_g20889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.13 OrthoFinder output from all 47 species
Aop_g24005 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene25905.t1 Aspi01Gene25905 component *(DDR) of ISWI chromatin remodeling complex &... 0.13 OrthoFinder output from all 47 species
Azfi_s0008.g011647 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Ceric.07G054500.1 Ceric.07G054500 not classified & original description: pacid=50627528... 0.13 OrthoFinder output from all 47 species
Ceric.22G043400.1 Ceric.22G043400 not classified & original description: pacid=50614394... 0.06 OrthoFinder output from all 47 species
Ceric.23G067000.1 Ceric.23G067000 component *(DDR) of ISWI chromatin remodeling complex &... 0.16 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021582.33 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g531350 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g07539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09060 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.12 OrthoFinder output from all 47 species
Dcu_g14005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33884 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.23 OrthoFinder output from all 47 species
GSVIVT01008246001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036441001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_14005 No alias no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os11g36030.1 LOC_Os11g36030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g09082 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.08 OrthoFinder output from all 47 species
Len_g30723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38243 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.17 OrthoFinder output from all 47 species
MA_10426537g0020 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_618433g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13607 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.17 OrthoFinder output from all 47 species
Nbi_g03121 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.2 OrthoFinder output from all 47 species
Ppi_g14537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021110 No alias not classified & original description: CDS=70-1113 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026484 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Sam_g06325 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Solyc02g063060.4.1 Solyc02g063060 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc02g090200.3.1 Solyc02g090200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g072250.2.1 Solyc11g072250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g39832 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Spa_g49821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13874 No alias component *(DDR) of ISWI chromaTin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e011227_P001 Zm00001e011227 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e022617_P002 Zm00001e022617 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 59 158
No external refs found!