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  5. Als_g03158

Als_g03158


Description : GTPase effector *(BDR) & original description: none


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03158
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00165p00000750 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G79420 No alias Protein of unknown function (DUF620) 0.02 OrthoFinder output from all 47 species
AT5G06610 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00588 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10609 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10862 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03174 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09619 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50254.t1 Aspi01Gene50254 GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63743.t1 Aspi01Gene63743 GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0031.g024486 No alias GTPase effector *(BDR) & original description: CDS=183-1394 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026341 No alias GTPase effector *(BDR) & original description: CDS=255-1508 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038152 No alias GTPase effector *(BDR) & original description: CDS=1-1299 0.02 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g78324 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02175 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02503 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g55795.1 LOC_Os01g55795 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os07g40150.1 LOC_Os07g40150 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Len_g05364 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29419 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
MA_133920g0010 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Mp7g18900.1 No alias GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
Nbi_g01199 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18707 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107350.3.1 Solyc01g107350 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Solyc03g078650.4.1 Solyc03g078650 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Spa_g01533 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03708 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41215 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55614 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e003042_P002 Zm00001e003042 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
Zm00001e010682_P001 Zm00001e010682 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e012456_P001 Zm00001e012456 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 153 394
No external refs found!