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  5. Pnu_g10579

Pnu_g10579 (GATB)


Aliases : GATB

Description : component *(GatB) of glutamyl-tRNA-dependent amidotransferase complex & original description: none


Gene families : OG0003791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10579
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00150510 GATB,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
AT1G48520 GATB GLU-ADT subunit B 0.03 OrthoFinder output from all 47 species
Adi_g022222 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
Aev_g01284 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Ehy_g02738 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.04 OrthoFinder output from all 47 species
Gb_19987 GATB component GatB of glutamyl-tRNA-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os11g34210.2 GATB, LOC_Os11g34210 component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g13336 GATB component *(GatB) of glutamyl-tRNA-dependent... 0.06 OrthoFinder output from all 47 species
Solyc09g090840.3.1 GATB, Solyc09g090840 component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species
Zm00001e024183_P002 GATB, Zm00001e024183 component GatB of glutamyl-tRNA-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR006075 Asn/Gln-tRNA_Trfase_suB/E_cat 140 432
IPR018027 Asn/Gln_amidotransferase 472 618
No external refs found!