Als_g02621


Description : actin stability co-factor *(PMIR) & original description: none


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02621

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00107090 PMI1,... Cytoskeleton.cp-actin-dependent plastid... 0.03 OrthoFinder output from all 47 species
Adi_g105459 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20246 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22592 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06081 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08736 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014097 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034625 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Cba_g26453 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37984 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G018400.1 PMI1, Ceric.32G018400 actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G017200.1 Ceric.35G017200 actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12279 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22530 PMI1 actin stability factor *(PMI1) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g16960 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013417001 PMI1 Cytoskeleton.cp-actin-dependent plastid... 0.06 OrthoFinder output from all 47 species
LOC_Os10g39430.1 PMI1, LOC_Os10g39430 actin stability factor (PMI1/PMI15) 0.03 OrthoFinder output from all 47 species
Len_g13950 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12843 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g25860.1 No alias actin stability factor (PMI1/PMI15). actin stability... 0.06 OrthoFinder output from all 47 species
Msp_g19859 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g10024 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10117 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12836 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53032 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17949 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30544 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11028 No alias acTin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13997 No alias acTin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28063 No alias acTin stability co-factor *(PMIR) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e002231_P001 PMI1, Zm00001e002231 actin stability factor (PMI1/PMI15) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 223 370
IPR018392 LysM_dom 1240 1273
No external refs found!