1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g02611

Als_g02611 (RAN1, HMA7)


Aliases : RAN1, HMA7

Description : P1B-type heavy metal cation-transporting ATPase *(HMA) & original description: none


Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02611
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene15494.t1 HMA5, Aspi01Gene15494 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63022.t2 HMA5, Aspi01Gene63022 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0514.g074936 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.05 OrthoFinder output from all 47 species
Cba_g29526 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G037000.1 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Ceric.15G058100.1 HMA5, Ceric.15G058100 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Dcu_g01989 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Dcu_g32732 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.07 OrthoFinder output from all 47 species
Dde_g48896 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Gb_15082 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.03 OrthoFinder output from all 47 species
Len_g48959 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Lfl_g10499 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
MA_10428640g0010 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.06 OrthoFinder output from all 47 species
Mp3g13400.1 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase (HMA) 0.02 OrthoFinder output from all 47 species
Msp_g07743 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Msp_g13394 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.08 OrthoFinder output from all 47 species
Nbi_g04977 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Nbi_g06794 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Ore_g28432 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Pp3c1_2960V3.1 HMA5, Pp3c1_2960 heavy metal atpase 5 0.01 OrthoFinder output from all 47 species
Pp3s37_140V3.1 HMA5, Pp3s37_140 heavy metal atpase 5 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021507 RAN1, HMA7 not classified & original description: CDS=1-858 0.02 OrthoFinder output from all 47 species
Smo122320 RAN1, HMA7 Solute transport.primary active transport.P-type ATPase... 0.02 OrthoFinder output from all 47 species
Solyc08g080870.3.1 HMA5, Solyc08g080870 P1B-type heavy metal cation-transporting ATPase (HMA) 0.05 OrthoFinder output from all 47 species
Solyc08g080890.3.1 HMA5, Solyc08g080890 P1B-type heavy metal cation-transporting ATPase (HMA) 0.06 OrthoFinder output from all 47 species
Tin_g16346 HMA5 P1B-type heavy metal cation-transporTing ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Zm00001e025137_P001 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase (HMA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 75 135
IPR006121 HMA_dom 158 219
No external refs found!