1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g02564

Als_g02564


Description : not classified & original description: none


Gene families : OG0002315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002315_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02564
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g49633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60242.t1 Aspi01Gene60242 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061157 No alias not classified & original description: CDS=1-2157 0.03 OrthoFinder output from all 47 species
Azfi_s1162.g098543 No alias not classified & original description: CDS=1-2112 0.02 OrthoFinder output from all 47 species
Ceric.14G097500.1 Ceric.14G097500 not classified & original description: pacid=50633682... 0.04 OrthoFinder output from all 47 species
Dcu_g01720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036466001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_25115 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g21210.1 LOC_Os09g21210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_17399g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g21690.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g15680.1 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g15870 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021282 No alias not classified & original description: CDS=1-2160 0.03 OrthoFinder output from all 47 species
Smo100942 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g046200.1.1 Solyc03g046200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g13499 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034014_P001 Zm00001e034014 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR040451 GH81_N 27 290
IPR040720 GH81_C 299 670
No external refs found!