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  5. Als_g02411

Als_g02411


Description : substrate adaptor of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g02411
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00208090 UFO,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dde_g29819 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Mp8g08370.1 HS, HWS F-box/kelch-repeat protein At5g15710 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g26476 No alias substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g26307 UFO substrate(LEAFY) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 18 57
No external refs found!