AMTR_s00040p00188540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.184

Description : Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme


Gene families : OG_01_0001006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001006_tree ,
OG_02_0002115 (LandPlants) Phylogenetic Tree(s): OG_02_0002115_tree ,
OG_03_0006934 (SeedPlants) Phylogenetic Tree(s): OG_03_0006934_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00188540
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.02 Archaeplastida
GSVIVT01008673001 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_33676 No alias starch branching enzyme 0.04 Archaeplastida
Mp3g21170.1 No alias starch branching enzyme 0.02 Archaeplastida
Mp7g15230.1 No alias starch branching enzyme 0.03 Archaeplastida
Pp3c16_13360V3.1 No alias starch branching enzyme 2.1 0.03 Archaeplastida
Pp3c1_1810V3.1 No alias Alpha amylase family protein 0.02 Archaeplastida
Pp3c27_2570V3.1 No alias starch branching enzyme 2.1 0.02 Archaeplastida
Pp3c5_8810V3.1 No alias starch branching enzyme 2.1 0.02 Archaeplastida
Smo437348 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Zm00001e013321_P002 No alias starch branching enzyme 0.02 Archaeplastida
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.02 LandPlants
GSVIVT01008673001 No alias Carbohydrate metabolism.starch... 0.02 LandPlants
Gb_33676 No alias starch branching enzyme 0.04 LandPlants
MA_15024g0020 No alias 1,4-alpha-glucan-branching enzyme 1,... 0.01 LandPlants
Mp7g15230.1 No alias starch branching enzyme 0.03 LandPlants
Smo437348 No alias Carbohydrate metabolism.starch... 0.03 LandPlants
Zm00001e014711_P001 No alias starch branching enzyme 0.02 LandPlants
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.02 SeedPlants
GSVIVT01033801001 No alias Carbohydrate metabolism.starch... 0.01 SeedPlants
Gb_33676 No alias starch branching enzyme 0.03 SeedPlants
LOC_Os02g32660.1 No alias starch branching enzyme 0.01 SeedPlants
Zm00001e014711_P001 No alias starch branching enzyme 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 704 795
IPR004193 Glyco_hydro_13_N 165 247
IPR006047 Glyco_hydro_13_cat_dom 314 385
No external refs found!