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  5. Als_g01780

Als_g01780


Description : centromeric cohesion protection factor *(SGO) & original description: none


Gene families : OG0005368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005368_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g01780

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10753.t1 Aspi01Gene10753 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G068500.1 Ceric.10G068500 centromeric cohesion protection factor *(SGO) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01031478001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
LOC_Os10g31930.1 LOC_Os10g31930 centromeric cohesion protection factor (SGO) 0.05 OrthoFinder output from all 47 species
Len_g22012 No alias centromeric cohesion protection factor *(SGO) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g15940 No alias centromeric cohesion protection factor *(SGO) & original... 0.03 OrthoFinder output from all 47 species
MA_913563g0010 No alias centromeric cohesion protection factor (SGO) 0.03 OrthoFinder output from all 47 species
Mp4g05800.1 No alias centromeric cohesion protection factor (SGO) 0.07 OrthoFinder output from all 47 species
Msp_g12980 No alias centromeric cohesion protection factor *(SGO) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g00660 No alias centromeric cohesion protection factor *(SGO) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015534 No alias centromeric cohesion protection factor *(SGO) & original... 0.05 OrthoFinder output from all 47 species
Sam_g15600 No alias centromeric cohesion protection factor *(SGO) & original... 0.03 OrthoFinder output from all 47 species
Solyc11g066350.2.1 Solyc11g066350 centromeric cohesion protection factor (SGO) 0.05 OrthoFinder output from all 47 species
Zm00001e004653_P001 Zm00001e004653 centromeric cohesion protection factor (SGO) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0045132 meiotic chromosome segregation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011515 Shugoshin_C 354 378
IPR011515 Shugoshin_C 219 235
No external refs found!