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  5. Als_g01071

Als_g01071 (MSL4)


Aliases : MSL4

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g01071

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene20698.t1 MSL5, Aspi01Gene20698 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009367 MSL6 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G023800.1 MSL6, Ceric.07G023800 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.22G069800.1 MSL5, Ceric.22G069800 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Cre13.g591100 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32324 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g10410.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Lfl_g28112 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15210 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07829 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46634 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47206 No alias mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11582 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 442 642
No external refs found!