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  5. Als_g00847

Als_g00847 (CPSRP43, CAO)


Aliases : CPSRP43, CAO

Description : component *(cpSRP43) of thylakoid membrane SRP insertion system & original description: none


Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00847

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270240 CPSRP43, CAO,... Protein translocation.chloroplast.thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Ceric.38G054000.1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Mp2g09760.1 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species
Ppi_g03789 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Solyc02g087400.1.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023780 Chromo_domain 314 358
IPR002110 Ankyrin_rpt 177 266
No external refs found!