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  5. Als_g00548

Als_g00548 (SCN1)


Aliases : SCN1

Description : guanine nucleotide dissociation inhibitor *(RopGDI) & original description: none


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00548

Target Alias Description ECC score Gene Family Method Actions
Ceric.19G001300.1 Ceric.19G001300 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04328 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68540.1 SCN1, LOC_Os01g68540 guanine nucleotide dissociation inhibitor (RopGDI) 0.04 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
Len_g03656 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Len_g38539 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
MA_9483417g0010 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
Msp_g39473 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g29800 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Ore_g30741 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ppi_g00513 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.05 OrthoFinder output from all 47 species
Sam_g06913 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Sam_g08474 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Sam_g50701 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Solyc04g014760.3.1 SCN1, Solyc04g014760 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Spa_g50736 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Zm00001e027139_P001 SCN1, Zm00001e027139 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0007266 Rho protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 66 254
No external refs found!