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  5. Pnu_g10213

Pnu_g10213


Description : translation initiation factor *(IF-3) & original description: none


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10213
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT2G24060 No alias Translation initiation factor 3 protein 0.02 OrthoFinder output from all 47 species
AT4G30690 No alias Translation initiation factor 3 protein 0.03 OrthoFinder output from all 47 species
Adi_g025876 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Adi_g102476 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Aev_g11375 No alias translation initiation factor *(IF-3) & original... 0.06 OrthoFinder output from all 47 species
Ala_g01530 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Als_g00759 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Aob_g39107 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35728.t1 Aspi01Gene35728 translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03761 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Ceric.07G007000.1 Ceric.07G007000 translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g02518 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.06 OrthoFinder output from all 47 species
Len_g15141 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g37528 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
MA_18402g0010 No alias Translation initiation factor IF3-2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g00833 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Pp3c14_5800V3.1 Pp3c14_5800 Translation initiation factor 3 protein 0.03 OrthoFinder output from all 47 species
Ppi_g00723 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Sam_g06858 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Solyc07g005830.3.1 Solyc07g005830 IF-3 translation initiation factor 0.03 OrthoFinder output from all 47 species
Tin_g29773 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR019815 Translation_initiation_fac_3_C 179 264
IPR019814 Translation_initiation_fac_3_N 102 170
No external refs found!