Pnu_g10079


Description : not classified & original description: none


Gene families : OG0001104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10079

Target Alias Description ECC score Gene Family Method Actions
AT2G01390 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g06759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10282 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g12238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03551.t1 Aspi01Gene03551 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G061400.1 Ceric.01G061400 not classified & original description: pacid=50592672... 0.04 OrthoFinder output from all 47 species
Ceric.11G091600.1 Ceric.11G091600 not classified & original description: pacid=50596008... 0.04 OrthoFinder output from all 47 species
Ceric.19G017900.1 Ceric.19G017900 not classified & original description: pacid=50576444... 0.02 OrthoFinder output from all 47 species
Dac_g34945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019029001 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.04 OrthoFinder output from all 47 species
GSVIVT01019040001 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.08 OrthoFinder output from all 47 species
Gb_11322 No alias Pentatricopeptide repeat-containing protein At2g01390... 0.03 OrthoFinder output from all 47 species
Gb_32462 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 OrthoFinder output from all 47 species
Gb_36347 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07340.1 LOC_Os01g07340 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Len_g17138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_89328g0010 No alias Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Msp_g06308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g15826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017150 No alias not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017180 CRM3, HCF152 not classified & original description: CDS=1-2193 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018721 No alias not classified & original description: CDS=1-2364 0.02 OrthoFinder output from all 47 species
Sam_g09085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g065510.1.1 Solyc02g065510 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species
Tin_g11870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13511 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g19487 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016802_P001 Zm00001e016802 Pentatricopeptide repeat-containing protein At5g66631... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 670 718
IPR002885 Pentatricopeptide_repeat 294 341
IPR002885 Pentatricopeptide_repeat 260 289
IPR002885 Pentatricopeptide_repeat 589 648
No external refs found!