Gb_18512


Description : pectin methylesterase


Gene families : OG_01_0000046 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000046_tree ,
OG_02_0000020 (LandPlants) Phylogenetic Tree(s): OG_02_0000020_tree ,
OG_03_0000014 (SeedPlants) Phylogenetic Tree(s): OG_03_0000014_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_18512
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.03 Archaeplastida
AT3G10710 RHS12 root hair specific 12 0.04 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.03 Archaeplastida
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.04 Archaeplastida
AT5G64640 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
GSVIVT01017687001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.05 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.07 Archaeplastida
Gb_24564 No alias pectin methylesterase 0.02 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g18650.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_10434786g0010 No alias No annotation 0.03 Archaeplastida
MA_133919g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 Archaeplastida
MA_2017g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_2253g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_26888g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_51464g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_86577g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c17_6440V3.1 No alias pectin methylesterase PCR fragment F 0.03 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc02g014300.2.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083840.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083870.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc09g075330.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e008055_P001 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
AT3G10710 RHS12 root hair specific 12 0.02 LandPlants
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT3G59010 PME61 pectin methylesterase 61 0.02 LandPlants
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 LandPlants
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 LandPlants
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.04 LandPlants
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01031667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Gb_10523 No alias pectin methylesterase 0.03 LandPlants
LOC_Os01g13320.1 No alias pectin methylesterase 0.03 LandPlants
LOC_Os02g18650.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os07g47830.1 No alias pectin methylesterase 0.03 LandPlants
LOC_Os11g07090.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os11g08750.1 No alias pectin methylesterase 0.02 LandPlants
LOC_Os11g36240.1 No alias pectin methylesterase 0.02 LandPlants
MA_10434786g0010 No alias No annotation 0.02 LandPlants
MA_158002g0020 No alias pectin methylesterase 0.02 LandPlants
MA_26888g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.02 LandPlants
MA_96515g0010 No alias pectin methylesterase 0.03 LandPlants
Smo114014 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 LandPlants
Smo154356 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Smo89509 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 LandPlants
Solyc01g099960.4.1 No alias pectin methylesterase 0.04 LandPlants
Solyc02g014300.2.1 No alias pectin methylesterase 0.03 LandPlants
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc03g083870.4.1 No alias pectin methylesterase 0.03 LandPlants
Solyc05g047590.4.1 No alias pectin methylesterase 0.03 LandPlants
Solyc06g009180.3.1 No alias pectin methylesterase 0.02 LandPlants
Solyc06g034360.2.1 No alias pectin methylesterase 0.02 LandPlants
Solyc09g075330.4.1 No alias pectin methylesterase 0.02 LandPlants
Solyc09g075350.4.1 No alias pectin methylesterase 0.03 LandPlants
Zm00001e017514_P001 No alias pectin methylesterase 0.02 LandPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e026790_P001 No alias pectin methylesterase 0.02 LandPlants
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00007p00101250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 SeedPlants
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00129p00047530 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01031667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 SeedPlants
LOC_Os02g18650.1 No alias pectin methylesterase 0.02 SeedPlants
LOC_Os07g47830.1 No alias pectin methylesterase 0.02 SeedPlants
MA_2017g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_436039g0010 No alias pectin methylesterase 0.02 SeedPlants
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.02 SeedPlants
MA_96515g0010 No alias pectin methylesterase 0.02 SeedPlants
Solyc01g099960.4.1 No alias pectin methylesterase 0.02 SeedPlants
Solyc05g047590.4.1 No alias pectin methylesterase 0.03 SeedPlants
Solyc09g075350.4.1 No alias pectin methylesterase 0.01 SeedPlants
Zm00001e025576_P001 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e036264_P001 No alias pectin methylesterase 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 76 226
IPR000070 Pectinesterase_cat 295 592
No external refs found!