MA_5530g0010


Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_5530g0010
Cluster HCCA cluster: Cluster_377

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G71450 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.01 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01015540001 No alias No description available 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01027770001 No alias No description available 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_10020434g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_502153g0010 No alias No description available 0.03 Gene family
MA_9321671g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_9786598g0010 No alias No description available 0.02 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.02 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.02 Gene family
Solyc03g117130.3.1 Solyc03g117130.3 No description available 0.01 Gene family
Solyc11g006050.1.1 Solyc11g006050.1 No description available 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.01 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051350 GRMZM2G048621 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d053707 GRMZM2G146028 No description available 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 27 75
No external refs found!