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Aliases : At-SCL30A, SCL30A
Description : RNA splicing factor *(SCL28/30/33) & original description: none
Gene families : OG0001193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001193_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g09848 | |
| Cluster | HCCA: Cluster_87 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00197p00027080 | At-SCL28, SCL28,... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g42789 | SCL30, At-SCL30 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G035200.1 | At-SCL30A,... | RNA splicing factor *(SCL28/30/33) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g038650 | At-SCL30A, SCL30A | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Cre13.g586916 | At-SCL28, SCL28 | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09492 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25309 | At-SCL30A, SCL30A | RNA splicing factor *(SCL28/30/33) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29764 | At-SCL30A, SCL30A | EC_2.7 transferase transferring phosphorus-containing... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020950_P002 | SCL30, At-SCL30,... | SCL28/30/33 RNA splicing factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | HCCA |
| MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 38 | 108 |
| No external refs found! |