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  5. Pnu_g09544

Pnu_g09544 (RIF10, PNP)


Aliases : RIF10, PNP

Description : EC_2.7 transferase transferring phosphorus-containing group & original description: none


Gene families : OG0002534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09544
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT3G03710 RIF10, PNP polyribonucleotide nucleotidyltransferase, putative 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021073.40 No alias RNA processing.organelle machineries.ribonuclease... 0.01 OrthoFinder output from all 47 species
Cre04.g214501 RIF10, PNP RNA processing.organelle machineries.ribonuclease... 0.02 OrthoFinder output from all 47 species
Len_g23960 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g20554 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Sam_g15795 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Spa_g04595 RIF10, PNP EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 241 303
IPR001247 ExoRNase_PH_dom1 460 593
IPR001247 ExoRNase_PH_dom1 107 237
IPR004088 KH_dom_type_1 699 757
IPR003029 S1_domain 772 835
No external refs found!