Pnu_g09268

Description : organellar phenylalanine-tRNA ligase & original description: none

Gene families : OG0004257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004257_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g09268

Target	Alias	Description	ECC score	Gene Family Method
Ala_g10771	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g48930	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0191.g056973	No alias	organellar phenylalanine-tRNA ligase & original...	0.03	OrthoFinder output from all 47 species
Cre02.g079600	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Dac_g07152	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g00588	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g02422	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.09	OrthoFinder output from all 47 species
Lfl_g08346	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Mp2g23280.1	No alias	phenylalanine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Nbi_g10100	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g16357	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g44045	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02158	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019810	No alias	organellar phenylalanine-tRNA ligase & original...	0.03	OrthoFinder output from all 47 species
Smo165421	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Spa_g56314	No alias	organellar phenylalanine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e019889_P001	Zm00001e019889	phenylalanine-tRNA ligase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072488	ammonium transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005121	Fdx_antiC-bd	383	473
IPR002319	Phenylalanyl-tRNA_Synthase	161	370

External Links

No external refs found!

Pnu_g09268

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation