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  5. Pnu_g09053

Pnu_g09053 (PAL4)


Aliases : PAL4

Description : EC_4.3 carbon-nitrogen lyase & original description: none


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09053
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Aev_g39212 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24727 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34002 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05558.t1 PAL4, Aspi01Gene05558 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25481.t1 PAL4, Aspi01Gene25481 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22478 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24302 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33771 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024294001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
GSVIVT01025703001 ATPAL2, PAL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
Gb_09812 ATPAL2, PAL2 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41630.2 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41650.3 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41680.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os04g43760.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
Len_g50108 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54933 ATPAL1, PAL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59256 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26446 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_24510V3.1 PAL3, ATPAL3, Pp3c7_24510 phenylalanine ammonia-lyase 4 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016271 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2382 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018764 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2271 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023741 PAL4 EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1545 0.02 OrthoFinder output from all 47 species
Tin_g10052 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023031_P002 PAL4, Zm00001e023031 phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 81 554
No external refs found!