MA_525914g0010


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity. CHLORORESPIRATORY REDUCTION22 (CRR22)


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_525914g0010
Cluster HCCA cluster: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G05240 MEF19 mitochondrial editing factor 19 0.04 Gene family
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G13230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT5G56310 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.11 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01009789001 No alias No description available 0.02 Gene family
GSVIVT01015466001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01016860001 No alias No description available 0.06 Gene family
GSVIVT01019401001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
GSVIVT01024588001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.02 Gene family
LOC_Os01g41650 Os01g0600400 No description available 0.03 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g04390 Os03g0136700 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
LOC_Os03g11700 Os03g0216400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os04g39410 Os04g0469400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.05 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.02 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.04 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.02 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_10429043g0020 No alias No description available 0.03 Gene family
MA_108139g0010 No alias No description available 0.02 Gene family
MA_121267g0010 No alias No description available 0.02 Gene family
MA_130735g0010 No alias No description available 0.01 Gene family
MA_135075g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_14659g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_14938g0010 No alias No description available 0.02 Gene family
MA_25584g0010 No alias No description available 0.01 Gene family
MA_27147g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_30949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
MA_3449g0010 No alias No description available 0.02 Gene family
MA_445076g0010 No alias No description available 0.06 Gene family
MA_56714g0010 No alias No description available 0.02 Gene family
MA_656915g0010 No alias No description available 0.04 Gene family
MA_745151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_7691g0010 No alias No description available 0.02 Gene family
MA_86894g0010 No alias No description available 0.02 Gene family
MA_90090g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_953793g0020 No alias No description available 0.02 Gene family
MA_97789g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Smo20633 PACid_15408246 No description available 0.01 Gene family
Smo334 PACid_15419253 No description available 0.01 Gene family
Smo85415 PACid_15419909 No description available 0.01 Gene family
Smo90123 PACid_15410274 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo92231 PACid_15416878 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo98955 PACid_15417483 No description available 0.02 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g088650.1.1 Solyc02g088650.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.02 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.02 Gene family
Zm00001d013136 GRMZM5G892151 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d020825 GRMZM5G851929 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d025656 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d032185 GRMZM2G161368 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d034933 No alias No description available 0.12 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d037891 No alias No description available 0.03 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.02 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 85 109
IPR002885 Pentatricopeptide_repeat 454 481
IPR002885 Pentatricopeptide_repeat 523 546
IPR002885 Pentatricopeptide_repeat 380 427
IPR002885 Pentatricopeptide_repeat 178 225
IPR002885 Pentatricopeptide_repeat 279 325
IPR002885 Pentatricopeptide_repeat 134 177
IPR032867 DYW_dom 621 744
No external refs found!