Pnu_g08913

Description : ssDNA-binding protein *(SSB) & original description: none

Gene families : OG0003904 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003904_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g08913
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00089800	MTSSB,...	Cell cycle.organelle machineries.DNA...	0.04	OrthoFinder output from all 47 species
Aev_g24901	No alias	ssDNA-binding protein *(SSB) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0313.g064215	MTSSB	ssDNA-binding protein *(SSB) & original description: CDS=113-796	0.03	OrthoFinder output from all 47 species
Cba_g11580	No alias	ssDNA-binding protein *(SSB) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g15198	No alias	ssDNA-binding protein *(SSB) & original description: none	0.04	OrthoFinder output from all 47 species
MA_10427900g0020	MTSSB	ssDNA-binding protein (SSB)	0.02	OrthoFinder output from all 47 species
MA_10430009g0010	No alias	ssDNA-binding protein (SSB)	0.02	OrthoFinder output from all 47 species
Solyc12g038370.2.1	Solyc12g038370	ssDNA-binding protein (SSB)	0.02	OrthoFinder output from all 47 species
Zm00001e032095_P004	MTSSB, Zm00001e032095	ssDNA-binding protein (SSB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004629	phospholipase C activity	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000424	Primosome_PriB/ssb	121	226

External Links

No external refs found!