Pnu_g08882


Description : not classified & original description: none


Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08882
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00253230 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00172620 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G52342 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G67910 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
Adi_g044951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20808.t1 Aspi01Gene20808 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G038200.1 Ceric.23G038200 not classified & original description: pacid=50611305... 0.04 OrthoFinder output from all 47 species
Ceric.29G029500.1 Ceric.29G029500 not classified & original description: pacid=50625444... 0.04 OrthoFinder output from all 47 species
Dcu_g29877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28915 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g32469.1 LOC_Os02g32469 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55600.1 LOC_Os02g55600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g55610.1 LOC_Os02g55610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g20600.1 LOC_Os03g20600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g33110.2 LOC_Os04g33110 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g25808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008383 No alias not classified & original description: CDS=1-396 0.03 OrthoFinder output from all 47 species
Sam_g26045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g007060.1.1 Solyc12g007060 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!