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Pnu_g08852 (ATCAF1, CAF1)


Aliases : ATCAF1, CAF1

Description : component *(CAF) of CRS2-CAF plastidial RNA splicing factor complexes & original description: none


Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08852

Target Alias Description ECC score Gene Family Method Actions
Adi_g054906 ATCAF1, CAF1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432369g0010 ATCAF1, CAF1 CRS2-associated factor 2, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 412 495
IPR001890 RNA-binding_CRM 294 377
No external refs found!