Gb_17277


Description : Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica (sp|q0dxs3|rdr1_orysj : 219.0)


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0057519 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0050520 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17277
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035851001 No alias RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase 0.02 Archaeplastida
MA_10435839g0010 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10436625g0010 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g014870.3.1 No alias ssRNA polymerase (RDR6) 0.02 Archaeplastida
Zm00001e007872_P002 No alias ssRNA polymerase (RDR2) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 3 63
No external refs found!