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Gb_17075


Description : chromatin remodeling factor (ERCC6)


Gene families : OG_01_0004952 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004952_tree ,
OG_02_0005405 (LandPlants) Phylogenetic Tree(s): OG_02_0005405_tree ,
OG_03_0005202 (SeedPlants) Phylogenetic Tree(s): OG_03_0005202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_17075
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT5G63950 CHR24 chromatin remodeling 24 0.06 Archaeplastida
Cpa|evm.model.tig00000441.21 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00001292.5 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre03.g183350 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01026450001 No alias Chromatin organisation.chromatin remodeling... 0.05 Archaeplastida
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.05 Archaeplastida
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.13 Archaeplastida
MA_18372g0020 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g29760.1 No alias chromatin remodeling factor (ERCC6) 0.12 Archaeplastida
Pp3c14_20620V3.1 No alias chromatin remodeling 24 0.05 Archaeplastida
Pp3c2_11030V3.1 No alias chromatin remodeling 24 0.07 Archaeplastida
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.07 Archaeplastida
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.09 Archaeplastida
AT5G63950 CHR24 chromatin remodeling 24 0.06 LandPlants
GSVIVT01026450001 No alias Chromatin organisation.chromatin remodeling... 0.05 LandPlants
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.05 LandPlants
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.09 LandPlants
MA_18372g0020 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.01 LandPlants
Mp1g29760.1 No alias chromatin remodeling factor (ERCC6) 0.11 LandPlants
Pp3c14_20620V3.1 No alias chromatin remodeling 24 0.05 LandPlants
Pp3c2_11030V3.1 No alias chromatin remodeling 24 0.07 LandPlants
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.07 LandPlants
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.08 LandPlants
AT5G63950 CHR24 chromatin remodeling 24 0.05 SeedPlants
GSVIVT01026450001 No alias Chromatin organisation.chromatin remodeling... 0.06 SeedPlants
LOC_Os04g59624.2 No alias chromatin remodeling factor (ERCC6) 0.05 SeedPlants
MA_18372g0010 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.08 SeedPlants
MA_18372g0020 No alias Protein CHROMATIN REMODELING 24 OS=Arabidopsis thaliana... 0.01 SeedPlants
Solyc01g068280.3.1 No alias chromatin remodeling factor (ERCC6) 0.08 SeedPlants
Zm00001e007521_P001 No alias chromatin remodeling factor (ERCC6) 0.09 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000330 SNF2_dom 1 131
IPR001650 Helicase_C 184 294
No external refs found!