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  5. Pnu_g08409

Pnu_g08409


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08409
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G38820 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g106449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33568.t2 Aspi01Gene33568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g694203 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g35422 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28132 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54340.1 LOC_Os01g54340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18474g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g05556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g082980.3.1 Solyc09g082980 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023428_P001 Zm00001e023428 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 23 246
No external refs found!