Pnu_g08311 (PRT1)

Aliases : PRT1

Description : type-II-residues E3 ubiquitin ligase *(PRT1) & original description: none

Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pnu_g08311
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
Aev_g34099	PRT1	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g11059	PRT1	type-II-residues E3 ubiquitin ligase *(PRT1) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g02417	PRT1	type-II-residues E3 ubiquitin ligase *(PRT1) & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015680	PRT1	type-II-residues E3 ubiquitin ligase *(PRT1) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e015136_P002	PRT1, Zm00001e015136	type-II-residues E3 ubiquitin ligase (PRT1)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000433	Znf_ZZ	297	334

External Links

No external refs found!