AMTR_s00039p00206760 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.174

Description : RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component

Gene families : OG_01_0006115 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006115_tree ,
OG_02_0008606 (LandPlants) Phylogenetic Tree(s): OG_02_0008606_tree ,
OG_03_0007854 (SeedPlants) Phylogenetic Tree(s): OG_03_0007854_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00039p00206760
Cluster	HCCA: Cluster_189

Target	Alias	Description	ECC score	Gene Family Method
AT5G59980	No alias	Polymerase/histidinol phosphatase-like	0.03	Archaeplastida
Pp3c23_18130V3.1	No alias	Polymerase/histidinol phosphatase-like	0.03	Archaeplastida
Solyc06g005200.3.1	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.02	Archaeplastida
Zm00001e020804_P002	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.05	Archaeplastida
AT5G59980	No alias	Polymerase/histidinol phosphatase-like	0.03	LandPlants
GSVIVT01025064001	No alias	RNA processing.ribonuclease activities.RNase P...	0.02	LandPlants
Pp3c23_18130V3.1	No alias	Polymerase/histidinol phosphatase-like	0.03	LandPlants
Solyc06g005200.3.1	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.02	LandPlants
Zm00001e020804_P002	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.05	LandPlants
AT5G59980	No alias	Polymerase/histidinol phosphatase-like	0.02	SeedPlants
GSVIVT01025064001	No alias	RNA processing.ribonuclease activities.RNase P...	0.02	SeedPlants
Solyc06g005200.3.1	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.02	SeedPlants
Zm00001e020804_P002	No alias	component RPP30/POP2 of RNA-dependent RNase P complex	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002738	RNase_P_p30	102	252

External Links

No external refs found!