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  5. AMTR_s00039p00202100

AMTR_s00039p00202100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.167

Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component


Gene families : OG_01_0005914 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005914_tree ,
OG_02_0008275 (LandPlants) Phylogenetic Tree(s): OG_02_0008275_tree ,
OG_03_0008374 (SeedPlants) Phylogenetic Tree(s): OG_03_0008374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00202100
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G64880 No alias Ribosomal protein S5 family protein 0.05 Archaeplastida
Cre09.g407100 No alias No description available 0.02 Archaeplastida
LOC_Os02g01230.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 Archaeplastida
MA_955371g0010 No alias component mtRPS5 of small ribosomal subunit proteome 0.04 Archaeplastida
Mp4g01640.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 Archaeplastida
Solyc11g008710.2.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.06 Archaeplastida
Zm00001e013392_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AT1G64880 No alias Ribosomal protein S5 family protein 0.05 LandPlants
LOC_Os02g01230.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 LandPlants
Mp4g01640.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 LandPlants
Solyc11g008710.2.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.06 LandPlants
Zm00001e013392_P001 No alias no hits & (original description: none) 0.02 LandPlants
AT1G64880 No alias Ribosomal protein S5 family protein 0.05 SeedPlants
LOC_Os02g01230.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 SeedPlants
Solyc11g008710.2.1 No alias component mtRPS5 of small ribosomal subunit proteome 0.06 SeedPlants
Zm00001e013392_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 438 509
IPR013810 Ribosomal_S5_N 365 427
No external refs found!