Pnu_g07993 (4CL3)


Aliases : 4CL3

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07993
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.02 OrthoFinder output from all 47 species
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.03 OrthoFinder output from all 47 species
Aev_g02337 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g19209 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11403.t1 AT4CL2, 4CL2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03267 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010497001 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
LOC_Os08g34790.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
MA_70509g0010 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
MA_8946476g0010 ACOS5 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.01 OrthoFinder output from all 47 species
Ppi_g29118 AT4CL2, 4CL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006230 4CL3 not classified & original description: CDS=1-975 0.02 OrthoFinder output from all 47 species
Smo110329 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g088710.3.1 ACOS5, Solyc02g088710 acyl-CoA synthetase (ACS5) 0.02 OrthoFinder output from all 47 species
Solyc06g068650.4.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Zm00001e008138_P001 ACOS5, Zm00001e008138 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
Zm00001e013798_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Zm00001e016374_P001 ACOS5, Zm00001e016374 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 48 456
IPR025110 AMP-bd_C 465 540
No external refs found!