AMTR_s00039p00196100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.160

Description : Auxin-responsive protein IAA13 OS=Arabidopsis thaliana


Gene families : OG_01_0000129 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000129_tree ,
OG_02_0000051 (LandPlants) Phylogenetic Tree(s): OG_02_0000051_tree ,
OG_03_0002729 (SeedPlants) Phylogenetic Tree(s): OG_03_0002729_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00196100
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00266860 evm_27.TU.AmTr_v1... Auxin-induced protein 22D OS=Vigna radiata var. radiata 0.04 Archaeplastida
GSVIVT01035295001 No alias Phytohormones.auxin.perception and signal... 0.03 Archaeplastida
Gb_13092 No alias Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36672 No alias Auxin-responsive protein IAA9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g07040.1 No alias Auxin-responsive protein IAA20 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os12g40890.1 No alias Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.02 Archaeplastida
MA_20293g0010 No alias Auxin-responsive protein IAA7 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e005073_P001 No alias Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e012059_P002 No alias Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e016705_P001 No alias Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e018053_P002 No alias Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.03 Archaeplastida
AMTR_s00002p00266860 evm_27.TU.AmTr_v1... Auxin-induced protein 22D OS=Vigna radiata var. radiata 0.04 LandPlants
GSVIVT01035295001 No alias Phytohormones.auxin.perception and signal... 0.03 LandPlants
Gb_13092 No alias Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 LandPlants
Gb_36672 No alias Auxin-responsive protein IAA9 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os05g44810.2 No alias repressor component Aux/IAA of auxin receptor complex 0.02 LandPlants
LOC_Os06g07040.1 No alias Auxin-responsive protein IAA20 OS=Oryza sativa subsp.... 0.04 LandPlants
MA_123046g0010 No alias repressor component Aux/IAA of auxin receptor complex 0.02 LandPlants
Mp6g05000.1 No alias Auxin-responsive protein IAA17 OS=Arabidopsis thaliana... 0.01 LandPlants
Smo116126 No alias Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica 0.02 LandPlants
Solyc01g097290.4.1 No alias Auxin-responsive protein IAA16 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e005073_P001 No alias Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.03 LandPlants
Zm00001e005634_P001 No alias Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.02 LandPlants
Zm00001e012059_P002 No alias Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.02 LandPlants
Zm00001e016705_P001 No alias Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.03 LandPlants
Zm00001e018053_P002 No alias Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.03 LandPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003311 AUX_IAA 35 170
No external refs found!